biotech
NovAT
Reliable novel HLA alleles identification from NGS data
User Documentation
Sample info
science
Sample name
folder
Input reads forward
folder
Input reads reverse
Current analysis is performed with the
IPD-IMGT/HLA Database release v3.44.0
HLA-A
Type in genotype for HLA-A
Choose sequencing regions for HLA-A
UTR-1
exon-1
intron-1
exon-2
intron-2
exon-3
intron-3
exon-4
intron-4
exon-5
intron-5
exon-6
intron-6
exon-7
intron-7
exon-8
UTR-2
HLA-B
Sample genotype for HLA-B:
Choose sequencing regions for HLA-B
UTR-1
exon-1
intron-1
exon-2
intron-2
exon-3
intron-3
exon-4
intron-4
exon-5
intron-5
exon-6
intron-6
exon-7
UTR-2
HLA-C
Sample genotype for HLA-C:
Choose sequencing regions for HLA-C
UTR-1
exon-1
intron-1
exon-2
intron-2
exon-3
intron-3
exon-4
intron-4
exon-5
intron-5
exon-6
intron-6
exon-7
intron-7
exon-8
UTR-2
HLA-DRB1
Sample genotype for HLA-DRB1:
Choose sequencing regions for HLA-DRB1
UTR-1
exon-1
intron-1
exon-2
intron-2
exon-3
intron-3
exon-4
intron-4
exon-5
intron-5
exon-6
UTR-2
HLA-DQB1
Sample genotype for HLA-DQB1:
Choose sequencing regions for HLA-DQB1
UTR-1
exon-1
intron-1
exon-2
intron-2
exon-3
intron-3
exon-4
intron-4
exon-5
intron-5
exon-6
UTR-2
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